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  • 2021 Markus Ralser is an elected EMBO member
  • 2020 The EMBO Gold medal
  • 2019 The Starling Medal, The Endocrinological Society, UK
  • 2018 The Colworth Medal, The Biochemical Society, UK
  • 2014 Südtiroler Wissenschaftspreis (‘South tyrolean Science Award))
  • 2012 Markus Ralser is an Embo Young Investigator
  • 2011 Wellcome Beit Prize
  • 2007 BioMed Central Research Award, Biology
  • 2011 ERC Starting Grant
  • 2021 ERC Synergy Grant